PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00028717-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bHLH
Protein Properties Length: 324aa    MW: 35865.7 Da    PI: 7.0491
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00028717-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.94.8e-104897154
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                        r++ +  rE+ RRdr+N+ f eL + l ++     +K++Ka+iL+ +v+ +k+L
  WALNUT_00028717-RA 48 RKVQKADREKLRRDRLNEQFLELGSTLDPD----RPKNDKATILTDTVQVLKDL 97
                        5677889********************997....79***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.9954797IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-1147120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.32E-748101No hitNo description
PfamPF000108.1E-84897IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-1248115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.5E-753103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MDQWMTDDKL KADLAPSSSS QPPNRSHNSH PDSRRSVDVE IKDPVATRKV QKADREKLRR  60
DRLNEQFLEL GSTLDPDRPK NDKATILTDT VQVLKDLTAE VNRLKTECAV LTEEARELTQ  120
EKNELREEKA SIKTDIDNMN VQYQQRVRVM FPWAAIDPSV VMGPPYSYPV PVPVPPGAIP  180
MHPSLQPYPF FGNQNPGAIH NPCSTFIPYP TPPNPPVEQP LAQRASTSQI SSKQDSKSKS  240
SSAHQRVNNV ERCDDSNDVA TDLELKMPGS SAQQDSSSGG TKGKQSQRKE RSVTENSSSS  300
RYSSSQGLQD SSSNSVGDVP KSKN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009379403.11e-166PREDICTED: transcription factor bHLH121-like
SwissprotQ9LT237e-82BH121_ARATH; Transcription factor bHLH121
TrEMBLM5WH391e-158M5WH39_PRUPE; Uncharacterized protein
STRINGVIT_04s0023g03430.t011e-138(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22823376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.11e-66bHLH family protein